Time Zone – GMT-5 (America/New_York)
| Pl | W | D | L | Diff | Pts | |||
| 1 | Vanraure | 34 | 21 | 6 | 7 | 44:20 | 24 | 69 |
| 2 | Tochigi City | 33 | 20 | 7 | 6 | 56:32 | 24 | 67 |
| 3 | Kagoshima Utd | 34 | 18 | 10 | 6 | 66:37 | 29 | 64 |
| 4 | Osaka | 34 | 18 | 7 | 9 | 47:30 | 17 | 61 |
| 5 | Tegevajaro Miyazaki | 33 | 16 | 10 | 7 | 54:39 | 15 | 58 |
| 6 | Giravanz Kitakyushu | 34 | 16 | 5 | 13 | 40:33 | 7 | 53 |
| 7 | Kanazawa | 34 | 16 | 5 | 13 | 46:40 | 6 | 53 |
| 8 | Nara Club | 34 | 14 | 10 | 10 | 45:40 | 5 | 52 |
| 9 | Tochigi SC | 34 | 14 | 7 | 13 | 34:33 | 1 | 49 |
| 10 | Gifu | 34 | 12 | 8 | 14 | 45:51 | -6 | 44 |
| 11 | Sagamihara | 34 | 11 | 11 | 12 | 32:42 | -10 | 44 |
| 12 | Fukushima Utd | 34 | 12 | 8 | 14 | 51:63 | -12 | 44 |
| 13 | Gainare Tottori | 34 | 12 | 6 | 16 | 34:42 | -8 | 42 |
| 14 | Ryukyu | 33 | 10 | 7 | 16 | 34:46 | -12 | 37 |
| 15 | Kochi United | 34 | 10 | 7 | 17 | 40:57 | -17 | 37 |
| 16 | Yamaga | 33 | 9 | 9 | 15 | 34:40 | -6 | 36 |
| 17 | Nagano | 34 | 9 | 8 | 17 | 29:46 | -17 | 35 |
| 18 | Kusatsu | 34 | 8 | 10 | 16 | 45:55 | -10 | 34 |
| 19 | Kamatamare | 34 | 8 | 7 | 19 | 38:54 | -16 | 31 |
| 20 | Azul Claro Numazu | 34 | 5 | 10 | 19 | 35:49 | -14 | 25 |
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